Genome-wide association mapping for identification of sheath blight resistance loci from wild rice Oryza rufipogon

Identification of trait-improving quantitative trait loci alleles from a wild rice relative, Oryza rufipogon.

Wild species are valued as a unique source of genetic variation, but they have rarely been used for the genetic improvement of quantitative traits. To identify trait-improving quantitative trait loci (QTL) alleles from exotic species, an accession of Oryza rufipogon, a relative of cultivated rice, was chosen on the basis of a genetic diversity study. An interspecific BC2 testcross population (V...

Screening Oryza Species Plants for Rice Sheath Blight Resistance

Sheath blight of rice (Oryza sativa L.) is a major rice disease throughout the world including the southern United States. This disease, which is caused by Rhizoctonia solani Kühn (teleomorph: Thanatephorus cucumeris (Frank) Donk), was first reported in 1910 and now occurs throughout temperate and tropical production areas, being most prominent where rice is grown under intense, high-fertility ...

Rice Sheath Blight Disease Resistance Identified in Oryza spp. Accessions

Phylogeography of Asian wild rice, Oryza rufipogon: a genome-wide view.

Asian wild rice (Oryza rufipogon) that ranges widely across the eastern and southern part of Asia is recognized as the direct ancestor of cultivated Asian rice (O. sativa). Studies of the geographic structure of O. rufipogon, based on chloroplast and low-copy nuclear markers, reveal a possible phylogeographic signal of subdivision in O. rufipogon. However, this signal of geographic differentiat...

Unveiling the genetic loci for a panicle developmental trait using genome-wide association study in rice

Panicle size has a high correlation with grain yield in rice. There is a bottleneck to identify the additional quantitative trait loci (QTL) for panicle size due to the conventional traits used for QTL mapping. To identify more genetic loci for panicle size, a panicle developmental trait (LNTB, the length from panicle neck-knot to the first primary branch in the rachis) related to panicle size ...